PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01888.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 375aa    MW: 40028.4 Da    PI: 8.6342
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01888.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-19107157155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Zpz_sc01888.1.g00010.1.am.mk 107 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALAIKG 157
                                   57*****887.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-13107157IPR001471AP2/ERF domain
CDDcd000185.09E-30107166No hitNo description
PROSITE profilePS5103223.973108165IPR001471AP2/ERF domain
SMARTSM003808.3E-38108171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-32108166IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-21108166IPR016177DNA-binding domain
PRINTSPR003673.0E-10109120IPR001471AP2/ERF domain
PRINTSPR003673.0E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MESDASHAPT TCSSSSSSTS SSSSLILNGG PEDLSKNCKP TTKRKRVASP DCQEVEANND  60
TTGTGTNGHG EESSSCCSTD DNAGSGNNNK AQAASAAAKR RSGFKHPSYR GVRRRSWGKW  120
VSEIREPRKK SRIWLGTFPT PEMAARAHDV AALAIKGRAA HLNFPHRAHE LPRPASTSPA  180
DIQAAAAQAA QCDASLSSGE VQPLSPEEAA CPESETVRAD SDGGQEHALF DLPDLLLDLR  240
DGLWWSPVWP GPESMAAEEY DVVGMQEPLL TERSKLKARR YPPRAFVLFR LRSSDDAQSR  300
SGLRISGEHA ATRGDGQHMG ARGARRHRTA APLRSACNLY VNHAGRPGGC SPRIPCCGSL  360
VAARSSLARS EARAV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-14105169267ATERF1
3gcc_A2e-14105169267ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5761314e-98KM576131.1 Oryza rufipogon dehydration responsive element binding protein 4-2 (DREB4-2) gene, promoter region and complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004976433.11e-76PREDICTED: ethylene-responsive transcription factor TINY-like
TrEMBLA0A0A9VBV14e-84A0A0A9VBV1_ARUDO; Uncharacterized protein
STRINGSi010703m4e-76(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-37ERF family protein